CDS

Accession Number TCMCG051C42917
gbkey CDS
Protein Id XP_002323165.1
Location complement(835700..836452)
Gene LOC7453711
GeneID 7453711
Organism Populus trichocarpa

Protein

Length 250aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002323129.3
Definition proteasome subunit alpha type-4 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category O
Description The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
KEGG_TC -
KEGG_Module M00337        [VIEW IN KEGG]
M00340        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko03051        [VIEW IN KEGG]
KEGG_ko ko:K02728        [VIEW IN KEGG]
EC 3.4.25.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03050        [VIEW IN KEGG]
map03050        [VIEW IN KEGG]
GOs GO:0000502        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005839        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0019773        [VIEW IN EMBL-EBI]
GO:0022626        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044445        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905368        [VIEW IN EMBL-EBI]
GO:1905369        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCGGAGATATGATAGCCGCACAACAATCTTCTCCCCTGAAGGACGTCTGTACCAAGTTGAGTATGCTATGGAAGCCATTGGAAATGCTGGGTCTGCAATAGGAATATTATCCAAAGATGGGGTTGTCTTGGTTGGTGAAAAGAAGGTTACATCCAAGCTATTGCAAACGTCAACTTCCACTGAGAAGATGTACAAGATTGATGATCATGTGGCTGTTGCAGTGGCTGGAATTATGTCTGATGCCAACATCCTAATCAACACTGCAAGGATCCAAGCACAACGCTACACCTTTGCATACCAAGAGCCAATGCCTGTAGAGCAGTTAGTTCAATCCCTTTGTGACACCAAGCAAGGGTACACACAGTTTGGTGGTCTTCGGCCCTTTGGTGTCTCGTTTCTGTTTGCAGGATGGGACAAAAATTATGGTTTCCAACTTTACATGAGCGATCCTAGTGGAAATTATGCTGGCTGGAAAGCTGCAGCAATTGGTGCAAACAACCAGGCTGCACAATCCATGTTAAAGCAGGATTACAGGGATGAAATCACAAGGGAAGAAGCTGTCCAGCTTGCTTTGAAGGTGCTCAGCAAAACTATGGATAGTACAAGTCTTACTTCAGAGAAGCTTGAACTGGCTGAGGTCTTCCTTTCTCCTTCTGGGAATGTCAAATACCAAATTTGCCCACCCAATGCTCTAAGCAAGCTGTTGGTGAAGTTTGGAGTTACCCAACCAGCTGCTGAGACTTCCTGA
Protein:  
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVAVAVAGIMSDANILINTARIQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYRDEITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGNVKYQICPPNALSKLLVKFGVTQPAAETS